BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025D10LP1|AL428380
(888 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1719 1696 0.0
3x_Contig56 724 0.0
>3x_Contig1719
Length = 15804
Score = 1696 bits (853), Expect = 0.0
Identities = 880/889 (98%), Gaps = 2/889 (0%)
Strand = Plus / Minus
Query: 1 gatcatatcactaatcagagcatattcttaacttcattgaagatgttccgaacagagttc 60
||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 3145 gatcatatcactaatcagagcatatacttaacctcattgaagatgttccgaacagagttc 3086
Query: 61 gaaagaaataaagaaattgaatgttgtcataactatgaatcaatgcaatcagccatggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3085 gaaagaaataaagaaattgaatgttgtcataactatgaatcaatgcaatcagccatggta 3026
Query: 121 aawacaaaccttatgacggtaaaggaactttatcttcgcgctcttatgtcagttaaaggt 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3025 aaaacaaaccttatgacggtaaaggaactttatcttcgcgctcttatgtcagttaaaggt 2966
Query: 181 atctcactggaaaaagcactaatgattcaatccagatatccaacgttcaaaactctacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2965 atctcactggaaaaagcactaatgattcaatccagatatccaacgttcaaaactctacta 2906
Query: 241 aaagcttatagaagatgtgcagcagaagcagatgcaaaaacattgatacaaaatgaactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2905 aaagcttatagaagatgtgcagcagaagcagatgcaaaaacattgatacaaaatgaactc 2846
Query: 301 aaagatgcaccaggtaacaggaagataggaaaatcactgtcacatactttatgggaaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2845 aaagatgcaccaggtaacaggaagataggaaaatcactgtcacatactttatgggaaact 2786
Query: 361 tttggtaaactgtgaactacaaaaataatacaatctcattatttaatgataatwtctata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2785 tttggtaaactgtgaactacaaaaataatacaatctcattatttaatgataatttctata 2726
Query: 421 aatgaagtggacatccacgccattttcgaacacttgacctatttcttcaagtgataaacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2725 aatgaagtggacatccacgccattttcgaacacttgacctatttcttcaagtgataaacc 2666
Query: 481 tttcacctccgggtaccaaatataaacgaacagccaattgaatatagtaaatraggcaaa 540
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2665 tttcacctccgggtaccaaatataaacgaacagccaattgaatatagtaaataaggcaaa 2606
Query: 541 gagtagcatcgtattttcgtttccaatcctatctgtgatagttaaataagtcaaagacaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2605 gagtagcatcgtattttcgtttccaatcctatctgtgatagttaaataagtcaaagacaa 2546
Query: 601 cacagagttagtcaaccaattagtacaggaaatcatagatccgcccacagctcttcggtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2545 cacagagttagtcaaccaattagtacaggaaatcatagatccgcccacagctcttcggtt 2486
Query: 661 caggggtaaaaattcgacactgctccacggtactactcccataccagtagcgtaa-caca 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2485 caggggtaaaaattcgacactgctccacggtactactcccataccagtagcgtaagcac- 2427
Query: 720 caacataaacaatcacagatacaaccaatagcgctaggttattcaattcgaaaccaacag 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2426 caacataaacaatcacagatacaaccaatagcgctaggttattcaattcgaaaccaacag 2367
Query: 780 aacataataacaaacctactgtcataatccatatagtcatgagtagcaaggttctttttc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2366 aacataataacaaacctactgtcataatccatatagtcatgagtagcaaggttctttttc 2307
Query: 840 ccatcgtgtcaatcaacttcattgctagtaaggkgaaggaaaaatttgt 888
||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 2306 ccatcgtgtcaatcaacttcattgctagtaaggtgaaagaaaaatttgt 2258
>3x_Contig56
Length = 1175
Score = 724 bits (364), Expect = 0.0
Identities = 394/404 (97%), Gaps = 1/404 (0%)
Strand = Plus / Minus
Query: 36 attgaagatgttccgaacagagttcgaaagaaataaagaaattgaatgttgtcataacta 95
|||||||||||| ||| |||||| ||||||||||||||||||||||||||| |||| ||
Sbjct: 413 attgaagatgttaagaaaagagttagaaagaaataaagaaattgaatgttgtaataaata 354
Query: 96 tgaatcaatgcaatcagccatggtaaawacaaaccttatgacggtaaaggaactttatct 155
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 353 tgaataaatgcaatcagccatggtaaaaacaaaccttatgacggtaaaggaactttatct 294
Query: 156 tcgcgctcttatgtcagttaaaggtatctcactggaaaaagcactaatgattcaatccag 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tcgcgctcttatgtcagttaaaggtatctcactggaaaaagcactaatgattcaatccag 234
Query: 216 atatccaacgttcaaaactctactaaaagcttatagaagatgtgcagcagaagcagatgc 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 atatccaacgttcaaaactctactaaaagcttatagaagatgtgcagcagaagcagatgc 174
Query: 276 aaaaacattgatacaaaatgaactcaaagatgcaccaggtaacaggaagataggaaaatc 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 aaaaacattgatacaaaatgaactcaaagatgcaccaggtaacaggaagataggaaaatc 114
Query: 336 actgtcacatactttatgggaaacttttggtaaactgtgaactacaaaaataatacaatc 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 actgtcacatactttatgggaaacttttggtaaactgtgaactacaaaaataatacaatc 54
Query: 396 tcattatttaatgataatwtctataaatgaagtggacatccacg 439
|||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 53 tcattatttaatgataatttctataaatgaagt-gacatccacg 11
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6944
Number of Sequences: 1807
Number of extensions: 6944
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 2
length of query: 888
length of database: 10,358,551
effective HSP length: 16
effective length of query: 872
effective length of database: 10,329,639
effective search space: 9007445208
effective search space used: 9007445208
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)